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biomed-shifts:practices [2018/02/02 15:17] sorina [Reproduce the problem] |
biomed-shifts:practices [2022/05/19 16:32] (current) sorina [Reproduce the problem] |
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* <text type="danger">**Check ARGO alarms**</text> concerning SEs, CEs. | * <text type="danger">**Check ARGO alarms**</text> concerning SEs, CEs. | ||
* <text type="danger">**Deal with full SEs, and resource decommissioning**</text> | * <text type="danger">**Deal with full SEs, and resource decommissioning**</text> | ||
- | * <text type="danger">**Report detected issues concerning ARGO box **</text> by assigning a team ticket to NGI_HR (Croatia). | + | * <text type="danger">**Report detected issues concerning ARGO box **</text> by assigning a team ticket to the dedicated ARGO support unit. |
<text type="danger">**Before submitting GGUS Team tickets**, have a **careful** look at the [[#Advices_about_ticket_submission|advices about ticket submission]]</text>. | <text type="danger">**Before submitting GGUS Team tickets**, have a **careful** look at the [[#Advices_about_ticket_submission|advices about ticket submission]]</text>. | ||
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====== Identification of issues ====== | ====== Identification of issues ====== | ||
+ | Link to Biomed ARGO page: [[https://biomed.ui.argo.grnet.gr/]] | ||
===== VOMS server ===== | ===== VOMS server ===== | ||
The proxy certificate creation should work: | The proxy certificate creation should work: | ||
Line 63: | Line 64: | ||
The VOMS administration interface should be available. From a UI, run the command: | The VOMS administration interface should be available. From a UI, run the command: | ||
<code>voms-admin --vo=biomed --host voms-biomed.in2p3.fr --port 8443 list-cas</code> | <code>voms-admin --vo=biomed --host voms-biomed.in2p3.fr --port 8443 list-cas</code> | ||
- | |||
- | ===== LFC server ===== | ||
- | Command "''time lfc-ls /grid''" should return in less than 30 seconds. | ||
===== Monitoring SEs ===== | ===== Monitoring SEs ===== | ||
==== Identify the problems ==== | ==== Identify the problems ==== | ||
- | ''lcg-cr'' and ''lcg-del'' should work on every SE of the VO. The ARGO box will help you identify faulty servers. You may use the following straight links: [[https://argo-mon-biomed.cro-ngi.hr/nagios/cgi-bin/status.cgi?servicegroup=SERVICE_SRM&style=overview|SRM service group status]], or [[https://argo-mon-biomed.cro-ngi.hr/nagios/cgi-bin/status.cgi?servicegroup=SERVICE_SRM&style=detail&servicestatustypes=16&sorttype=2&sortoption=6|Critical issues for service group SRM]] | + | |
+ | SRM probes used by ARGO box | ||
+ | |||
+ | - https://github.com/EGI-Foundation/nagios-plugins-srm | ||
+ | - based on the gfal2 library for the storage operations (gfal-copy, etc) | ||
+ | - queries the BDII service in order to build the Storage URL to test given the host-name and the VO name | ||
+ | - a X509 valid proxy certificate is needed to execute the probe (configured via X509_USER_PROXY variable). | ||
__Reminder__: do **NOT** submit a ticket if the service is in **downtime** or it is **not in proper production status**: see on [[http://operations-portal.in2p3.fr/vapor/resources/GL2ResVO?VOfilter=biomed|VAPOR]] the supporting resources or faulty resources. | __Reminder__: do **NOT** submit a ticket if the service is in **downtime** or it is **not in proper production status**: see on [[http://operations-portal.in2p3.fr/vapor/resources/GL2ResVO?VOfilter=biomed|VAPOR]] the supporting resources or faulty resources. | ||
==== Reproduce the problem ==== | ==== Reproduce the problem ==== | ||
- | <code>lcg-cr -v --connect-timeout 30 --sendreceive-timeout 900 --bdii-timeout 30 --srm-timeout 300 --vo biomed file:///some_of_your_file -l lfn:/grid/biomed/yourhome/some_file_name -d SE_HOSTNAME</code> | ||
- | The [[https://github.com/frmichel/vo-support-tools/blob/master/SE/lcg-cr.sh|lcg-cr.sh]] script automates the lcg-cr and lcg-del commands on a SE. | + | Manual SRM testing (copy file to SE) |
+ | |||
+ | From the biomed-ui.fedcloud.fr VM, where gfal2 is already installed : | ||
+ | |||
+ | 1. Build the Storage URL following the model <code>srm://marsedpm.in2p3.fr:8446/dpm/in2p3.fr/home/biomed</code> | ||
+ | |||
+ | NOTE 1: the model works for DPM SEs, not sure about storm or dCache (a storm example is srm:////storm-01.roma3.infn.it:8444/srm/managerv2?SFN=/biomed) | ||
+ | |||
+ | NOTE 2: would be interesing to use the probe for building this URL | ||
+ | |||
+ | 2. Use gfal-ls to check that we can list the folder | ||
+ | <code>gfal-ls srm://marsedpm.in2p3.fr:8446/dpm/in2p3.fr/home/biomed/user/s/scamarasu </code> | ||
+ | 3. Use gfal-copy to copy a file (in this case, job.jdl) to the above URL | ||
+ | <code>gfal-copy job.jdl srm://marsedpm.in2p3.fr:8446/dpm/in2p3.fr/home/biomed/user/s/scamarasu/ | ||
+ | Copying file:///home/spop/dirac/job.jdl [DONE] after 17s </code> | ||
+ | 4. Check the copy was copied and is now listed | ||
+ | <code>gfal-ls srm://marsedpm.in2p3.fr:8446/dpm/in2p3.fr/home/biomed/user/s/scamarasu | ||
+ | job.jdl </code> | ||
+ | |||
+ | Note that in some cases, the gfal-ls may work (as well as gfal-mkdir), but not the gfal-copy: | ||
+ | <code>gfal-mkdir srm://clrlcgse01.in2p3.fr:8446/dpm/in2p3.fr/home/biomed/scamarasu | ||
+ | gfal-ls srm://clrlcgse01.in2p3.fr:8446/dpm/in2p3.fr/home/biomed/scamarasu | ||
+ | gfal-copy dirac/job.jdl srm://clrlcgse01.in2p3.fr:8446/dpm/in2p3.fr/home/biomed/scamarasu/ | ||
+ | gfal-copy error: 70 (Communication error on send) - Could not open destination: globus_xio: Unable to connect to clrlcgse01.in2p3.fr:2811 globus_xio: System error in connect: Connection refused globus_xio: A system call failed: Connection refused </code> | ||
==== Ignored alarms ==== | ==== Ignored alarms ==== | ||
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When a SE is to planned for decommissioning, launch the specific [[Biomed-Shifts:decommisioning|SE decommissioning procedure]]. | When a SE is to planned for decommissioning, launch the specific [[Biomed-Shifts:decommisioning|SE decommissioning procedure]]. | ||
+ | Older decommissionning page is available here [[Biomed-Shifts:old:old-decommisioning|Old SE decommissioning procedure]]. | ||
===== Monitoring CEs ===== | ===== Monitoring CEs ===== | ||
==== Identify the problems ==== | ==== Identify the problems ==== | ||
- | The ARGO box is the best way to identify faulty resources. You may use the following straight link: [[https://argo-mon-biomed.cro-ngi.hr/nagios/cgi-bin/status.cgi?servicegroup=SERVICE_CREAM-CE&style=detail&servicestatustypes=16&sorttype=2&sortoption=6|Critical issues for service group CREAM-CE]] | + | The ARGO box is the best way to identify faulty resources. |
+ | ==== Reproduce the problem ==== | ||
- | Probes documentation is available at https://wiki.egi.eu/wiki/ROC_SAM_Tests. | + | 1. Manual ARC CE submission |
- | ==== Reproduce the problem ==== | + | - see https://www.nordugrid.org/arc/arc6/users/submit_job.html for more details and a job description example |
- | Reproduce the problem by one of the two methods below. | + | |
+ | - submit with "arcsub job.xrsl -c CENAME" | ||
+ | |||
+ | Further ARC CE documentation available in French : https://grand-est.fr/support-utilisateurs/documentation-en-ligne/guide-dutilisation-de-arc-ce/ | ||
- | Download this {{:biomed-shifts:test.jdl|test JDL}}, rename it as test_ce_noreq.jdl and submit it to the concerned CE. Check the BDII (lcg-infosites) to get the full name of a queue on that CE and run the command: | + | and DIRAC :https://grand-est.fr/support-utilisateurs/documentation-en-ligne/guide-dutilisation-de-dirac/ |
- | <code> glite-ce-job-submit -a -r <CE hostname>><port>/<queue_name> test_ce_noreq.jdl</code> | + | |
- | Then check that the status and the output when the submit command has completed: | + | |
- | <code>glite-ce-job-status <jobId></code> | + | |
- | Reminder: __before submitting a ticket make sure one is not open yet__. | + | 2. Manual HTCndorCE submission |
+ | TO BE DONE | ||
==== Ignored alarms ==== | ==== Ignored alarms ==== | ||
Shifters shall focus on failed job submissions in priority: probes ''emi.cream.CREAMCE-AllowedSubmission''. | Shifters shall focus on failed job submissions in priority: probes ''emi.cream.CREAMCE-AllowedSubmission''. |